Cytomegalovirus DNA, Qualitative Real-Time PCR, Saliva

Cytomegalovirus DNA, Qualitative Real-Time PCR, Saliva

This test is used to screen for or diagnose congenital cytomegalovirus infection in newborns.

Cytomegalovirus DNA, Qualitative Real-Time PCR, Saliva

Test Summary

 

Cytomegalovirus DNA, Qualitative Real-Time PCR, Saliva

Test code: 37010

 

Clinical use

  • Diagnose or screen for congenital cytomegalovirus (CMV) infection in newborns

Clinical background

Congenital CMV infection is the leading infectious cause of birth defects in the United States.1 Overall prevalence of congenital CMV infection is approximately 0.5% but Black newborns are almost twice as likely to be affected than the general population.2 Congenital CMV infection can lead to long-term neurological and developmental sequelae, even death.2 Hearing loss is the most common sequela of congenital CMV infection.2

In symptomatic newborns, early diagnosis and antiviral therapy improve outcomes.2 However, signs and symptoms (eg, jaundice, petechiae, hepatosplenomegaly, microcephaly, retinitis, intracerebral calcifications) are nonspecific and only present in 10% of newborn with CMV infection.1,2 Laboratory testing is required for diagnosis and involves direct detection of the virus or viral DNA from saliva, urine, blood, or cerebrospinal fluid (CSF) within 21 days of birth.1,2 Postnatal infection, which does not typically cause severe disease, cannot be ruled out beyond 21 days because saliva CMV shedding in patients with congenital CMV infection can last until 20 months of age.1–3 

In asymptomatic newborns, detecting congenital CMV infection informs decisions on appropriate surveillance of hearing sensitivity and early intervention of hearing loss.2,4 Different screening approaches are used to identify congenital CMV infection in the United States.2,5,6 Newborns who fail hearing screening need laboratory testing to screen for congenital CMV. However, hearing-targeted CMV screens may miss about 40% of newborns for whom hearing loss is not detectable in the first month.2 Consequently, universal newborn screening for congenital CMV infection is recommended by the American Cochlear Implant Alliance, the American Academy of Otolaryngology–Head and Neck Surgery, and the National CMV Foundation.4 However, the optimal specimen for screening (saliva, urine, or dried blood spot [DBS]) remains an active research question.4–6

According to the Centers for Disease Control and Prevention, polymerase chain reaction (PCR) testing using saliva specimens is preferred for screening and diagnosing congenital CMV infection.1 The diagnostic accuracy of salivary PCR is high for both general newborns (sensitivity 96.5%, specificity 99.9%) and newborns at high risk for congenital CMV infection (sensitivity 94.4%, specificity 95.7%).7 However, false-positive results can occur when CMV sheds in breast milk from a maternal infection. A urine PCR test is recommended to confirm positive results of saliva PCR.2,6 

Quest Diagnostics offers the Cytomegalovirus DNA, Qualitative Real-Time PCR, Saliva test for screening for and diagnosing congenital CMV among newborns (test code 37010). Quest also offers a qualitative PCR test to detect CMV in urine (test code 10601). 

Individuals suitable for testing

  • Newborns within 21 days of birth
  • Newborns with signs or symptoms consistent with congenital CMV infection
  • Newborns who fail newborn hearing screening

Method

  • Qualitative real-time PCR
  • Analytical sensitivity: 200 IU/mL CMV (limit of detection)
  • Analytical specificity: No observed cross-reactivity with potentially cross-reacting pathogens including herpes simplex virus types 1 and 2, varicella-zoster virus, and Epstein-Barr virus

Interpretive information

A “detected” result on a specimen collected is consistent with congenital CMV infection. Confirmation of positive results with a CMV PCR test on a urine specimen is needed.2,6 

A “not detected” result is consistent with the absence of CMV infection. High concentrations of lipids are known to interfere with this assay and may cause false-negative results.

References

  1. Centers for Disease Control and Prevention. CMV fact sheet for healthcare providers. Updated June 14, 2018. Accessed October 16, 2025. https://stacks.cdc.gov/view/cdc/137322
  2. Committee on Infectious Diseases American Academy of Pediatrics. Cytomegalovirus infection. In: Kimberlin DW, Banerjee R, Barnett ED, et al, eds. Red Book: 2024–2027 Report of the Committee on Infectious Diseases. American Academy of Pediatrics; 2024:344-352. doi:10.1542/9781610027373-s3_003_015
  3. Pinninti S, Pati S, Novak Z, et al. Cytomegalovirus saliva shedding kinetics in children with congenital CMV infection. J Pediatr Infect Dis Soc. 2025;14(5):piaf040. doi:10.1093/jpids/piaf040
  4. Pesch MH, Brown KD, Birath AL, et al. American Cochlear Implant Alliance position statement on newborn congenital cytomegalovirus screening. Otolaryngol Head Neck Surg. 2025;172(2):728-733. doi:10.1002/ohn.1079
  5. Schleiss MR, Blázquez-Gamero D. Universal newborn screening for congenital cytomegalovirus infection. Lancet Child Adolesc Heal. 2025;9(1):57-70. doi:10.1016/s2352-4642(24)00237-2
  6. Centers for Disease Control and Prevention. Laboratory testing for CMV and congenital CMV. Updated April 15, 2024. Accessed October 22, 2025. https://www.cdc.gov/cytomegalovirus/php/laboratories/index.html
  7. Rady SMA, Abdelmoati MI, Sabra S, et al. Diagnostic performance of salivary PCR for the detection of congenital cytomegalovirus: a systematic review and meta-analysis. Viruses. 2025;17(9):1253. doi:10.3390/v17091253
     

Content reviewed 11/2025

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This test is used to screen for or diagnose congenital cytomegalovirus infection in newborns.

Cytomegalovirus DNA, Qualitative Real-Time PCR, Saliva

Test Summary

 

Cytomegalovirus DNA, Qualitative Real-Time PCR, Saliva

Test code: 37010

 

Clinical use

  • Diagnose or screen for congenital cytomegalovirus (CMV) infection in newborns

Clinical background

Congenital CMV infection is the leading infectious cause of birth defects in the United States.1 Overall prevalence of congenital CMV infection is approximately 0.5% but Black newborns are almost twice as likely to be affected than the general population.2 Congenital CMV infection can lead to long-term neurological and developmental sequelae, even death.2 Hearing loss is the most common sequela of congenital CMV infection.2

In symptomatic newborns, early diagnosis and antiviral therapy improve outcomes.2 However, signs and symptoms (eg, jaundice, petechiae, hepatosplenomegaly, microcephaly, retinitis, intracerebral calcifications) are nonspecific and only present in 10% of newborn with CMV infection.1,2 Laboratory testing is required for diagnosis and involves direct detection of the virus or viral DNA from saliva, urine, blood, or cerebrospinal fluid (CSF) within 21 days of birth.1,2 Postnatal infection, which does not typically cause severe disease, cannot be ruled out beyond 21 days because saliva CMV shedding in patients with congenital CMV infection can last until 20 months of age.1–3 

In asymptomatic newborns, detecting congenital CMV infection informs decisions on appropriate surveillance of hearing sensitivity and early intervention of hearing loss.2,4 Different screening approaches are used to identify congenital CMV infection in the United States.2,5,6 Newborns who fail hearing screening need laboratory testing to screen for congenital CMV. However, hearing-targeted CMV screens may miss about 40% of newborns for whom hearing loss is not detectable in the first month.2 Consequently, universal newborn screening for congenital CMV infection is recommended by the American Cochlear Implant Alliance, the American Academy of Otolaryngology–Head and Neck Surgery, and the National CMV Foundation.4 However, the optimal specimen for screening (saliva, urine, or dried blood spot [DBS]) remains an active research question.4–6

According to the Centers for Disease Control and Prevention, polymerase chain reaction (PCR) testing using saliva specimens is preferred for screening and diagnosing congenital CMV infection.1 The diagnostic accuracy of salivary PCR is high for both general newborns (sensitivity 96.5%, specificity 99.9%) and newborns at high risk for congenital CMV infection (sensitivity 94.4%, specificity 95.7%).7 However, false-positive results can occur when CMV sheds in breast milk from a maternal infection. A urine PCR test is recommended to confirm positive results of saliva PCR.2,6 

Quest Diagnostics offers the Cytomegalovirus DNA, Qualitative Real-Time PCR, Saliva test for screening for and diagnosing congenital CMV among newborns (test code 37010). Quest also offers a qualitative PCR test to detect CMV in urine (test code 10601). 

Individuals suitable for testing

  • Newborns within 21 days of birth
  • Newborns with signs or symptoms consistent with congenital CMV infection
  • Newborns who fail newborn hearing screening

Method

  • Qualitative real-time PCR
  • Analytical sensitivity: 200 IU/mL CMV (limit of detection)
  • Analytical specificity: No observed cross-reactivity with potentially cross-reacting pathogens including herpes simplex virus types 1 and 2, varicella-zoster virus, and Epstein-Barr virus

Interpretive information

A “detected” result on a specimen collected is consistent with congenital CMV infection. Confirmation of positive results with a CMV PCR test on a urine specimen is needed.2,6 

A “not detected” result is consistent with the absence of CMV infection. High concentrations of lipids are known to interfere with this assay and may cause false-negative results.

References

  1. Centers for Disease Control and Prevention. CMV fact sheet for healthcare providers. Updated June 14, 2018. Accessed October 16, 2025. https://stacks.cdc.gov/view/cdc/137322
  2. Committee on Infectious Diseases American Academy of Pediatrics. Cytomegalovirus infection. In: Kimberlin DW, Banerjee R, Barnett ED, et al, eds. Red Book: 2024–2027 Report of the Committee on Infectious Diseases. American Academy of Pediatrics; 2024:344-352. doi:10.1542/9781610027373-s3_003_015
  3. Pinninti S, Pati S, Novak Z, et al. Cytomegalovirus saliva shedding kinetics in children with congenital CMV infection. J Pediatr Infect Dis Soc. 2025;14(5):piaf040. doi:10.1093/jpids/piaf040
  4. Pesch MH, Brown KD, Birath AL, et al. American Cochlear Implant Alliance position statement on newborn congenital cytomegalovirus screening. Otolaryngol Head Neck Surg. 2025;172(2):728-733. doi:10.1002/ohn.1079
  5. Schleiss MR, Blázquez-Gamero D. Universal newborn screening for congenital cytomegalovirus infection. Lancet Child Adolesc Heal. 2025;9(1):57-70. doi:10.1016/s2352-4642(24)00237-2
  6. Centers for Disease Control and Prevention. Laboratory testing for CMV and congenital CMV. Updated April 15, 2024. Accessed October 22, 2025. https://www.cdc.gov/cytomegalovirus/php/laboratories/index.html
  7. Rady SMA, Abdelmoati MI, Sabra S, et al. Diagnostic performance of salivary PCR for the detection of congenital cytomegalovirus: a systematic review and meta-analysis. Viruses. 2025;17(9):1253. doi:10.3390/v17091253
     

Content reviewed 11/2025

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Reference ranges are provided as general guidance only. To interpret test results use the reference range in the laboratory report.

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