Apolipoprotein L1 (APOL1) Renal Risk Variant Genotyping
Apolipoprotein L1 (APOL1) Renal Risk Variant Genotyping
This test is used to assist the evaluation of a potential donor for kidney transplantation.
Test Summary
Apolipoprotein L1 (APOL1) Renal Risk Variant Genotyping
Test code: 1291
Clinical use
- Assist evaluation of a potential donor for kidney transplantation
Clinical background
Two variants in the APOL1 gene, known as G1 and G2, increase risk for various types of chronic kidney disease (CKD), such as focal segmental glomerulosclerosis, HIV-associated nephropathy, and hypertension-attributed end-stage kidney disease (ESKD).1 These APOL1 risk variants are mostly limited to individuals with recent West sub-Saharan African ancestry.1,2 About 10% to 15% of African American individuals have a high-risk APOL1 genotype (ie, carry 2 risk variants).2 The estimated risk of CKD among these individuals is 15% to 20%,1 about 41% greater than that of individuals with a low-risk genotype (ie, carrying 0 or 1 risk variant).3
In the kidney transplantation setting, a donor's high-risk APOL1 genotype may increase risks for both the donor and the recipient. Living kidney donors with high-risk genotypes may have a greater decline in kidney function and a higher risk of CKD than donors with low-risk genotypes.4,5 For transplant recipients, a high-risk genotype in a deceased donor is associated with shorter allograft survival.6,7 The risk of premature allograft loss associated with a high-risk genotype in a living donor is currently unknown.
Given the potential risks associated with APOL1, testing for APOL1 risk variants during the evaluation of living donors may help inform decisions on kidney donation. Transplantation outcomes obtained from the APOL1 Long-term Kidney Transplantation Outcomes Network (APOLLO) study will likely aid in the development of clinical practice guidelines for APOL1 testing.8 Interim recommendations from the American Society of Transplantation's Living Donor Community of Practice indicate that all potential donor candidates who self-report African ancestry—including African, African American, Afro-Caribbean, and Black Hispanic/Latinx—should receive counseling on APOL1 and the risk of ESKD.9 Though individuals with North African or mixed ancestry are less likely to have a high-risk genotype, they should still be counseled on APOL1.9 After counseling and an initial evaluation, donor candidates with known independent risk factors for ESKD (eg, hypertension) who wish to pursue donation and whose ESKD risk is deemed acceptable may be offered APOL1 testing for additional risk stratification.9
Individuals suitable for testing
- Potential donors for living-donor kidney transplantation who self-report African ancestry
Method
- Dual PCR and Sanger sequencing to detect G1 (c.1024A>G and c.1152T>G) and G2 (c.1164_1169del) variants in APOL1 exon 6
Interpretive information
Detection of any 2 APOL1 risk alleles (G1/G1, G2/G2, or G1/G2) indicates an increased risk for developing APOL1-associated CKD. The isolated finding of a high-risk APOL1 genotype should not disqualify a candidate for kidney donation.9 Rather, APOL1 genotype should be considered in conjunction with the individual's full health profile, including clinical presentation, family history, and other laboratory testing results, during pretransplant evaluation.10
This test does not detect variants located outside of APOL1 exon 6. In addition, the test may not detect variants in individuals with mosaicism or allele dropout. False-positive or false-negative results are rare but may occur. Specimens with degraded or a low concentration of DNA, low white blood cell counts, or substances that inhibit PCR (eg, excess heme or heparin) may result in assay failure.
Additional assistance in interpretation of results is available from our genetic counselors by calling 1.866.GENE.INFO (1.866.436.3463).
References
- Freedman BI, Burke W, Divers J, et al. Diagnosis, education, and care of patients with APOL1-associated nephropathy: a Delphi consensus and systematic review. J Am Soc Nephrol. 2021;32(7):1765-1778. doi:10.1681/ASN.2020101399
- Limou S, Nelson GW, Kopp JB, et al. APOL1 kidney risk alleles: population genetics and disease associations. Adv Chronic Kidney Dis. 2014;21(5):426-433. doi:10.1053/j.ackd.2014.06.005
- Jagannathan R, Rajagopalan K, Hogan J, et al. Association between APOL1 genotype and kidney diseases and annual kidney function change: a systematic review and meta-analysis of the prospective studies. Int J Nephrol Renovasc Dis. 2021;14:97-104. doi:10.2147/ijnrd.S294191
- Doshi MD, Ortigosa-Goggins M, Garg AX, et al. APOL1 genotype and renal function of Black living donors. J Am Soc Nephrol. 2018;29(4):1309-1316. doi:10.1681/ASN.2017060658
- Mena-Gutierrez AM, Reeves-Daniel AM, Jay CL, et al. Practical considerations for APOL1 genotyping in the living kidney donor evaluation. Transplantation. 2020;104(1):27-32. doi:10.1097/TP.0000000000002933
- Freedman BI, Pastan SO, Israni AK, et al. APOL1 genotype and kidney transplantation outcomes from deceased African American donors. Transplantation. 2016;100(1):194-202. doi:10.1097/TP.0000000000000969
- Reeves-Daniel AM, DePalma JA, Bleyer AJ, et al. The APOL1 gene and allograft survival after kidney transplantation. Am J Transplant. 2011;11(5):1025-1030. doi:10.1111/j.1600-6143.2011.03513.x
- Freedman BI, Moxey-Mims MM, Alexander AA, et al. APOL1 Long-term Kidney Transplantation Outcomes Network (APOLLO): design and rationale. Kidney Int Rep. 2020;5(3):278-288. doi:10.1016/j.ekir.2019.11.022
- Doshi MD, Gordon EJ, Freedman BI, et al. Integrating APOL1 kidney-risk variant testing in live kidney donor evaluation: an expert panel opinion. Transplantation. 2021;105(10):2132-2134. doi:10.1097/tp.0000000000003641
- Newell KA, Formica RN, Gill JS, et al. Integrating APOL1 gene variants into renal transplantation: considerations arising from the American Society of Transplantation Expert Conference. Am J Transplant. 2017;17(4):901-911. doi:10.1111/ajt.14173
Content reviewed 10/2025
This test is used to assist the evaluation of a potential donor for kidney transplantation.
Test Summary
Apolipoprotein L1 (APOL1) Renal Risk Variant Genotyping
Test code: 1291
Clinical use
- Assist evaluation of a potential donor for kidney transplantation
Clinical background
Two variants in the APOL1 gene, known as G1 and G2, increase risk for various types of chronic kidney disease (CKD), such as focal segmental glomerulosclerosis, HIV-associated nephropathy, and hypertension-attributed end-stage kidney disease (ESKD).1 These APOL1 risk variants are mostly limited to individuals with recent West sub-Saharan African ancestry.1,2 About 10% to 15% of African American individuals have a high-risk APOL1 genotype (ie, carry 2 risk variants).2 The estimated risk of CKD among these individuals is 15% to 20%,1 about 41% greater than that of individuals with a low-risk genotype (ie, carrying 0 or 1 risk variant).3
In the kidney transplantation setting, a donor's high-risk APOL1 genotype may increase risks for both the donor and the recipient. Living kidney donors with high-risk genotypes may have a greater decline in kidney function and a higher risk of CKD than donors with low-risk genotypes.4,5 For transplant recipients, a high-risk genotype in a deceased donor is associated with shorter allograft survival.6,7 The risk of premature allograft loss associated with a high-risk genotype in a living donor is currently unknown.
Given the potential risks associated with APOL1, testing for APOL1 risk variants during the evaluation of living donors may help inform decisions on kidney donation. Transplantation outcomes obtained from the APOL1 Long-term Kidney Transplantation Outcomes Network (APOLLO) study will likely aid in the development of clinical practice guidelines for APOL1 testing.8 Interim recommendations from the American Society of Transplantation's Living Donor Community of Practice indicate that all potential donor candidates who self-report African ancestry—including African, African American, Afro-Caribbean, and Black Hispanic/Latinx—should receive counseling on APOL1 and the risk of ESKD.9 Though individuals with North African or mixed ancestry are less likely to have a high-risk genotype, they should still be counseled on APOL1.9 After counseling and an initial evaluation, donor candidates with known independent risk factors for ESKD (eg, hypertension) who wish to pursue donation and whose ESKD risk is deemed acceptable may be offered APOL1 testing for additional risk stratification.9
Individuals suitable for testing
- Potential donors for living-donor kidney transplantation who self-report African ancestry
Method
- Dual PCR and Sanger sequencing to detect G1 (c.1024A>G and c.1152T>G) and G2 (c.1164_1169del) variants in APOL1 exon 6
Interpretive information
Detection of any 2 APOL1 risk alleles (G1/G1, G2/G2, or G1/G2) indicates an increased risk for developing APOL1-associated CKD. The isolated finding of a high-risk APOL1 genotype should not disqualify a candidate for kidney donation.9 Rather, APOL1 genotype should be considered in conjunction with the individual's full health profile, including clinical presentation, family history, and other laboratory testing results, during pretransplant evaluation.10
This test does not detect variants located outside of APOL1 exon 6. In addition, the test may not detect variants in individuals with mosaicism or allele dropout. False-positive or false-negative results are rare but may occur. Specimens with degraded or a low concentration of DNA, low white blood cell counts, or substances that inhibit PCR (eg, excess heme or heparin) may result in assay failure.
Additional assistance in interpretation of results is available from our genetic counselors by calling 1.866.GENE.INFO (1.866.436.3463).
References
- Freedman BI, Burke W, Divers J, et al. Diagnosis, education, and care of patients with APOL1-associated nephropathy: a Delphi consensus and systematic review. J Am Soc Nephrol. 2021;32(7):1765-1778. doi:10.1681/ASN.2020101399
- Limou S, Nelson GW, Kopp JB, et al. APOL1 kidney risk alleles: population genetics and disease associations. Adv Chronic Kidney Dis. 2014;21(5):426-433. doi:10.1053/j.ackd.2014.06.005
- Jagannathan R, Rajagopalan K, Hogan J, et al. Association between APOL1 genotype and kidney diseases and annual kidney function change: a systematic review and meta-analysis of the prospective studies. Int J Nephrol Renovasc Dis. 2021;14:97-104. doi:10.2147/ijnrd.S294191
- Doshi MD, Ortigosa-Goggins M, Garg AX, et al. APOL1 genotype and renal function of Black living donors. J Am Soc Nephrol. 2018;29(4):1309-1316. doi:10.1681/ASN.2017060658
- Mena-Gutierrez AM, Reeves-Daniel AM, Jay CL, et al. Practical considerations for APOL1 genotyping in the living kidney donor evaluation. Transplantation. 2020;104(1):27-32. doi:10.1097/TP.0000000000002933
- Freedman BI, Pastan SO, Israni AK, et al. APOL1 genotype and kidney transplantation outcomes from deceased African American donors. Transplantation. 2016;100(1):194-202. doi:10.1097/TP.0000000000000969
- Reeves-Daniel AM, DePalma JA, Bleyer AJ, et al. The APOL1 gene and allograft survival after kidney transplantation. Am J Transplant. 2011;11(5):1025-1030. doi:10.1111/j.1600-6143.2011.03513.x
- Freedman BI, Moxey-Mims MM, Alexander AA, et al. APOL1 Long-term Kidney Transplantation Outcomes Network (APOLLO): design and rationale. Kidney Int Rep. 2020;5(3):278-288. doi:10.1016/j.ekir.2019.11.022
- Doshi MD, Gordon EJ, Freedman BI, et al. Integrating APOL1 kidney-risk variant testing in live kidney donor evaluation: an expert panel opinion. Transplantation. 2021;105(10):2132-2134. doi:10.1097/tp.0000000000003641
- Newell KA, Formica RN, Gill JS, et al. Integrating APOL1 gene variants into renal transplantation: considerations arising from the American Society of Transplantation Expert Conference. Am J Transplant. 2017;17(4):901-911. doi:10.1111/ajt.14173
Content reviewed 10/2025