Cystic Fibrosis Gene Deletion or Duplication
Test Code
Clinical Significance
Cystic Fibrosis Gene Deletion or Duplication - This test detects large deletion or duplication copy number variants in the CFTR gene in CF patients or patients with the potential diagnosis of CF where only one or no pathogenic variants have been identified. Large deletions and duplications comprise only a very small percentage of variants in the CFTR gene. As a result, this test is not recommended as a first-line test unless a specific known familial deletion or duplication has been identified. It is best used either as a follow up or in conjunction with full gene sequencing. It is not recommended for routine carrier screening.
The ...
Test Resources
Algorithm
Cystic Fibrosis Carrier ScreeningAlgorithm
Cystic Fibrosis DiagnosisTest Guide
Cystic Fibrosis Test Selection GuideTest Details
Methodology
Alternative Name(s)
Preferred Specimen(s)
5 mL whole blood collected in an EDTA (lavender-top) tube, EDTA (royal blue-top) tube, ACD (yellow-top) tube or Sodium heparin (green-top) tube
Alternative Specimen(s)
Fetal specimens: 10 mL amniotic fluid collected in a sterile, leak-proof container • Amniocyte or chorionic villus (CVS) culture cells collected in each of two sterile T25 flasks • 10 mg dissected chorionic villus (CVS) biopsy collected in a sterile tube filled with sterile culture media
Minimum Volume
3 mL whole blood • 10 mL amniotic fluid • Cultured cells 75% confluent • 10 mg chorionic villi
Collection Instructions
Do not hold specimen; forward to laboratory when specimen arrives. Contact performing laboratory for stability determination. For any other sample type call 866-GENE-INFO (1-866-436-3463).
Whole blood: Normal phlebotomy procedure. Specimen stability is crucial. Store and ship at room temperature immediately. Do not freeze.
For fetal testing:
1) Please call 1-866-GENE-INFO (1-866-436-3463) prior to submission.
2) Documentation of parental carrier status must be provided.
3) It is required that Maternal Cell Contamination Study, STR Analysis be ordered in conjunction with fetal testing. A separate tube of maternal blood (EDTA) is required for this test.
Note: Do not reject. Forward to performing laboratory for evaluation of sample.
Amniotic fluid: Normal collection procedure. Specimen stability is crucial. Store and ship at room temperature immediately. Do not refrigerate or freeze; forward to laboratory when sample arrives.
Amniocyte or chorionic villus (CVS) culture: Two sterile T25 flasks, 75% confluent, filled with culture medium. Specimen stability is crucial. Store and ship at room temperature immediately. Do not refrigerate or freeze; forward to laboratory when cells arrive.
Dissected chorionic villus (CVS) biopsy: 10-20 mg dissected chorionic villi collected in sterile tube filled with sterile culture media. Specimen stability is crucial. Store and ship at room temperature immediately. Do not refrigerate or freeze; forward to laboratory when sample arrives.
Transport Container
EDTA (lavender-top) tube
Transport Temperature
Room temperature
Specimen Stability
Whole blood
Room temperature: 14 days
Refrigerated: 14 days
Frozen: UnacceptableFetal specimens
Room temperature: 48 hours
Refrigerated: Unacceptable
Frozen: Unacceptable
Setup Schedule
Do not hold specimen; forward to laboratory when specimen arrives. Contact performing laboratory for stability determination. For any other sample type call 866-GENE-INFO (1-866-436-3463).
Whole blood: Normal phlebotomy procedure. Specimen stability is crucial. Store and ship at room temperature immediately. Do not freeze.
For fetal testing:
1) Please call 1-866-GENE-INFO (1-866-436-3463) prior to submission.
2) Documentation of parental carrier status must be provided.
3) It is required that Maternal Cell Contamination Study, STR Analysis be ordered in conjunction with fetal testing. A separate tube of maternal blood (EDTA) is required for this test.
Note: Do not reject. Forward to performing laboratory for evaluation of sample.
Amniotic fluid: Normal collection procedure. Specimen stability is crucial. Store and ship at room temperature immediately. Do not refrigerate or freeze; forward to laboratory when sample arrives.
Amniocyte or chorionic villus (CVS) culture: Two sterile T25 flasks, 75% confluent, filled with culture medium. Specimen stability is crucial. Store and ship at room temperature immediately. Do not refrigerate or freeze; forward to laboratory when cells arrive.
Dissected chorionic villus (CVS) biopsy: 10-20 mg dissected chorionic villi collected in sterile tube filled with sterile culture media. Specimen stability is crucial. Store and ship at room temperature immediately. Do not refrigerate or freeze; forward to laboratory when sample arrives.
Whole blood
Room temperature: 14 days
Refrigerated: 14 days
Frozen: Unacceptable
Fetal specimens
Room temperature: 48 hours
Refrigerated: Unacceptable
Frozen: Unacceptable